Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944938.1_cds_XP_016487646.1_78354
CDS Infomation

[gene=LOC107807721] [db_xref=GeneID:107807721] [protein=beta-amylase-like] [protein_id=XP_016487646.1] [location=complement(join(24980..25171,25281..25520,25640..25849,25954..26217,26300..26464,26564..26962,27061..27126,28067..28255))] [gbkey=CDS]
Sequence

ATGGCAAGCATTGGAACTTCAAAATTAGGTGTTATGCCGGAGGTAATGGGATTTTCACAC
CAAGAACTGTCACTTGTCATGTTTAAGAAATTCAAGCTGGCTAGAAAACAACTTCTCCAC
CAAAATCTCACATTTACTAATCGCCGGAAAAATGGAATTACTCGAGCCATAGCACCAGAA
GCAACCAAGGCAACTGGTCCAACATCTAGCAGTGTCCCTTCAGCCAATTATGTGCCTGTT
TATGTAATGCTTCCATTAGATGTTATTTCACTAGACAATGTTTTTCGGAACCAAGATAAG
TGTGAGAAGCAGTTCAAGGAGCTGAGAGCAGCCGGAGTTGATGGGATCATGGTGGATGTC
TGGTGGGGGATCGTTGAGGCAAATGGCCCCAGGCAATATGATTGGTCTGCCTACAGGAGC
TTGTTCCAACTTGTTCAAAAGACTGGCCTCAAAATTCAAGCTATTATGTCATTCCATCAA
TGTGGTGGAAATATCGGAGATGATGTTTTCATTCCTATACCCAAATGGGTGCTCGCAATT
GGAGAAAACAACCCTGATGTTTTCTATACTAATCGGGCTGGTACCAGGAACAAGGAATGC
CTCTCACTTGCTGTTGATAACCAACCTCTGTTTGAAAGTCGGACTGCTGTCCAGATGTAC
AGTGACTACATGAGGAGCTTCAGAGAGAATATGTCTGATTTCTTGGAAGCTGGAAGCATA
GTAGACATAGAGGTAGGACTTGGCCCTGCTGGTGAGCTAAGATATCCGTCATATACTCAG
TCTCAGGGATGGAAGTTCCCTGGCATTGGAGAATTTCAGTGCTACGACAAGTATATGAGA
ACAGATTTCAAGGAGGCAGCGACAAATGCAGGCTACCCGCAGTGGGATCTTCCCGATGAT
GCAGGAACATATAATGATATACCTGTCAAAACAGGATTCTTTGGACCAAACGGAACGTAC
CTTACAGAGAAAGGGAAGTTCTTCTTGACTTGGTACTCTAGCAAGCTACTGCTTCATGGA
GATCAGATCCTTGATGAAGCAAACAAAGTTTTCCTGGGATGCAAAGTGAAGCTATCAGCT
AAAGTAGCTGGAATTCACTGGTGGTACAAAGATGCCAGCCATGCTGCAGAGCTAACATCA
GGATATTATAATTTGGACAATCGGGATGGATATCGACCAATAGCGAGGATGATGTCAAGG
CACCATGGTACCTTGAATTTCACTTGCCTTGAGATGAGGAATTCAGAACAGCCAGCTTAT
GCTAAGTCTGGTCCTCAAGAGTTAGTTCAACAGGTTTTGAGTGTTGGCTGGAAAGAGAAC
ATTGATGTAGCAGGTGAGAATGCACTTTCAAGATATGATGGCTACGCCTACAACCAAATC
CTTCTCAATGCTAGGCCAAATGGTATCAACAAAAGTGGTCCACCAAAACTAAAGATGGCT
GGGCTGACTTACCTTCGATTATCAGACAAACTCCTTCAAAAGAGGAACTTCAATACCTTT
AAAACATTTGTCAAGAAAATGCATGCCGATCTGGATTACTGTCCAGAATATGAAAAACCA
GCTCCACTGAGCAGATCAAAAAGGGAGATTTCAATGGATGAACTTGTAACAGCAACCCAA
CGAACAAAACCATTCCCATGGGATGAACAGACAGATGCAAGAATTGGCGGTATATTGGCT
GAATACTGGGATAGGCTGCTTAACAAGTTCTTTCTCTCTAACTGA

Peptide Sequence

PEP ID

XP_016487646.1
PEP Infomation

PREDICTED: beta-amylase-like [Nicotiana tabacum]
Sequence

MASIGTSKLGVMPEVMGFSHQELSLVMFKKFKLARKQLLHQNLTFTNRRKNGITRAIAPE
ATKATGPTSSSVPSANYVPVYVMLPLDVISLDNVFRNQDKCEKQFKELRAAGVDGIMVDV
WWGIVEANGPRQYDWSAYRSLFQLVQKTGLKIQAIMSFHQCGGNIGDDVFIPIPKWVLAI
GENNPDVFYTNRAGTRNKECLSLAVDNQPLFESRTAVQMYSDYMRSFRENMSDFLEAGSI
VDIEVGLGPAGELRYPSYTQSQGWKFPGIGEFQCYDKYMRTDFKEAATNAGYPQWDLPDD
AGTYNDIPVKTGFFGPNGTYLTEKGKFFLTWYSSKLLLHGDQILDEANKVFLGCKVKLSA
KVAGIHWWYKDASHAAELTSGYYNLDNRDGYRPIARMMSRHHGTLNFTCLEMRNSEQPAY
AKSGPQELVQQVLSVGWKENIDVAGENALSRYDGYAYNQILLNARPNGINKSGPPKLKMA
GLTYLRLSDKLLQKRNFNTFKTFVKKMHADLDYCPEYEKPAPLSRSKREISMDELVTATQ
RTKPFPWDEQTDARIGGILAEYWDRLLNKFFLSN

Transcript Sequence

Gene sequence data has not been registered.